- Information
- Symbol: APG,OsPIL16
- MSU: LOC_Os05g04740
- RAPdb: Os05g0139100
- PSP score
- LOC_Os05g04740.2: 0.9145
- LOC_Os05g04740.1: 0.8563
- PLAAC score
- LOC_Os05g04740.2: 0
- LOC_Os05g04740.1: 0
- pLDDT score
- 55.96
- Protein Structure from AlphaFold and UniProt
- Publication
- Characterization of a Set of Phytochrome-Interacting Factor-Like bHLH Proteins inOryza sativa, 2014, Bioscience, Biotechnology and Biochemistry.
- An atypical bHLH protein encoded by POSITIVE REGULATOR OF GRAIN LENGTH 2 is involved in controlling grain length and weight of rice through interaction with a typical bHLH protein APG, 2012, Breed Sci.
- Antagonistic actions of HLH/bHLH proteins are involved in grain length and weight in rice, 2012, PLoS One.
- Phytochrome B Negatively Affects Cold Tolerance by Regulating OsDREB1 Gene Expression through Phytochrome Interacting Factor-Like Protein OsPIL16 in Rice., 2016, Front Plant Sci.
- Genbank accession number
- Key message
- Previously, we have shown that an antagonistic pair of basic helix-loop-helix (bHLH) proteins, POSITIVE REGULATOR OF GRAIN LENGTH 1 (PGL1) and ANTAGONIST OF PGL1 (APG), is involved in controlling rice grain length
- PGL2 interacts with a typical bHLH protein APG, a negative regulator of rice grain length and weight, in vitro and in vivo
- These findings suggest that PGL2 and PGL1 redundantly suppress the function of APG by forming heterodimers to positively regulate the rice grain length, while the pathway through which BU1, the closest homolog of PGL2, controls grain length is independent of APG
- An atypical bHLH protein encoded by POSITIVE REGULATOR OF GRAIN LENGTH 2 is involved in controlling grain length and weight of rice through interaction with a typical bHLH protein APG
- PGL1-APG represents a new grain length and weight-controlling pathway in which APG is a negative regulator whose function is inhibited by PGL1
- Transcription of two known grain-length-related genes, GS3 and SRS3, was largely unaffected in the PGL1-overexpressing and APG-silenced plants
- Phytochrome B Negatively Affects Cold Tolerance by Regulating OsDREB1 Gene Expression through Phytochrome Interacting Factor-Like Protein OsPIL16 in Rice.
- Based on these results, we propose that phyB deficiency positively regulates OsDREB1 expression through OsPIL16 to enhance cell membrane integrity and to reduce the malondialdehyde concentration, resulting in the improved cold tolerance of the phyB mutants
- Expression pattern analyses revealed that OsPIL16 transcripts were induced by cold stress and was significantly higher in the phyB mutant than in the WT
- Connection
- APG~OsPIL16, OsPIL11, Characterization of a Set of Phytochrome-Interacting Factor-Like bHLH Proteins inOryza sativa, In this study, we identified and characterized a set of highly homologous members (designated OsPIL11 to OsPIL16) in the model monocotyledon rice (Oryza sativa)
- APG~OsPIL16, PGL2~OsBUL1, An atypical bHLH protein encoded by POSITIVE REGULATOR OF GRAIN LENGTH 2 is involved in controlling grain length and weight of rice through interaction with a typical bHLH protein APG, PGL2 interacts with a typical bHLH protein APG, a negative regulator of rice grain length and weight, in vitro and in vivo
- APG~OsPIL16, PGL2~OsBUL1, An atypical bHLH protein encoded by POSITIVE REGULATOR OF GRAIN LENGTH 2 is involved in controlling grain length and weight of rice through interaction with a typical bHLH protein APG, These findings suggest that PGL2 and PGL1 redundantly suppress the function of APG by forming heterodimers to positively regulate the rice grain length, while the pathway through which BU1, the closest homolog of PGL2, controls grain length is independent of APG
- APG~OsPIL16, PGL1, An atypical bHLH protein encoded by POSITIVE REGULATOR OF GRAIN LENGTH 2 is involved in controlling grain length and weight of rice through interaction with a typical bHLH protein APG, Previously, we have shown that an antagonistic pair of basic helix-loop-helix (bHLH) proteins, POSITIVE REGULATOR OF GRAIN LENGTH 1 (PGL1) and ANTAGONIST OF PGL1 (APG), is involved in controlling rice grain length
- APG~OsPIL16, PGL1, An atypical bHLH protein encoded by POSITIVE REGULATOR OF GRAIN LENGTH 2 is involved in controlling grain length and weight of rice through interaction with a typical bHLH protein APG, These findings suggest that PGL2 and PGL1 redundantly suppress the function of APG by forming heterodimers to positively regulate the rice grain length, while the pathway through which BU1, the closest homolog of PGL2, controls grain length is independent of APG
- APG~OsPIL16, PGL1, Antagonistic actions of HLH/bHLH proteins are involved in grain length and weight in rice, We identified the interaction partner of PGL1 and named it ANTAGONIST OF PGL1 (APG)
- APG~OsPIL16, PGL1, Antagonistic actions of HLH/bHLH proteins are involved in grain length and weight in rice, PGL1 and APG interacted in vivo and localized in the nucleus
- APG~OsPIL16, PGL1, Antagonistic actions of HLH/bHLH proteins are involved in grain length and weight in rice, As expected, silencing of APG produced the same phenotype as overexpression of PGL1, suggesting antagonistic roles for the two genes
- APG~OsPIL16, PGL1, Antagonistic actions of HLH/bHLH proteins are involved in grain length and weight in rice, Transcription of two known grain-length-related genes, GS3 and SRS3, was largely unaffected in the PGL1-overexpressing and APG-silenced plants
- APG~OsPIL16, PGL1, Antagonistic actions of HLH/bHLH proteins are involved in grain length and weight in rice, PGL1-APG represents a new grain length and weight-controlling pathway in which APG is a negative regulator whose function is inhibited by PGL1
- APG~OsPIL16, SRS3~OsKINESIN-13A, Antagonistic actions of HLH/bHLH proteins are involved in grain length and weight in rice, Transcription of two known grain-length-related genes, GS3 and SRS3, was largely unaffected in the PGL1-overexpressing and APG-silenced plants
- APG~OsPIL16, GS3, Antagonistic actions of HLH/bHLH proteins are involved in grain length and weight in rice, Transcription of two known grain-length-related genes, GS3 and SRS3, was largely unaffected in the PGL1-overexpressing and APG-silenced plants
- APG~OsPIL16, OsDREB1B, Phytochrome B Negatively Affects Cold Tolerance by Regulating OsDREB1 Gene Expression through Phytochrome Interacting Factor-Like Protein OsPIL16 in Rice., Chromatin immunoprecipitation (ChIP)-qPCR assay revealed that OsPIL16 can bind to the N-box region of OsDREB1B promoter
- APG~OsPIL16, PHYB~OsphyB, Phytochrome B Negatively Affects Cold Tolerance by Regulating OsDREB1 Gene Expression through Phytochrome Interacting Factor-Like Protein OsPIL16 in Rice., Expression pattern analyses revealed that OsPIL16 transcripts were induced by cold stress and was significantly higher in the phyB mutant than in the WT
- APG~OsPIL16, PHYB~OsphyB, Phytochrome B Negatively Affects Cold Tolerance by Regulating OsDREB1 Gene Expression through Phytochrome Interacting Factor-Like Protein OsPIL16 in Rice., Moreover, yeast two-hybrid assay showed that OsPIL16 can bind to rice PHYB
- APG~OsPIL16, PHYB~OsphyB, Phytochrome B Negatively Affects Cold Tolerance by Regulating OsDREB1 Gene Expression through Phytochrome Interacting Factor-Like Protein OsPIL16 in Rice., Based on these results, we propose that phyB deficiency positively regulates OsDREB1 expression through OsPIL16 to enhance cell membrane integrity and to reduce the malondialdehyde concentration, resulting in the improved cold tolerance of the phyB mutants
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