BBX

2022-11-15 | Categories gene family 

• Information
  • OsBBX1,OsDBB3c, LOC_Os01g10580, Os01g0202500.
  • OsBBX10,OsJ, LOC_Os03g50310, Os03g0711100.
  • OsBBX11,OsSTO, LOC_Os04g41560, Os04g0493000.
  • OsBBX12,OsC, LOC_Os04g42020, Os04g0497700.
  • OsBBX13, LOC_Os04g45690, Os04g0540200.
  • OsBBX14,OsDBB3b, LOC_Os05g11510, Os05g0204600.
  • OsBBX15, LOC_Os06g01340, Os06g0103000.
  • OsBBX16,OsDBB3a, LOC_Os06g05890, Os06g0152200.
  • OsBBX17,OsL, LOC_Os06g15330, Os06g0264200.
  • OsBBX19,OsM,DTH2,qDTH-2, LOC_Os06g19444, Os06g0298200.
  • OsBBX2, LOC_Os02g07930, Os02g0176000.
  • OsBBX20,OsE, LOC_Os06g44450, Os06g0654900.
  • OsBBX21, LOC_Os06g45040, Os06g0661200.
  • OsBBX22, LOC_Os06g49880, Os06g0713000.
  • OsBBX23, LOC_Os07g47140, Os07g0667300.
  • OsBBX24, LOC_Os08g08120, Os08g0178800.
  • OsBBX25,OsG, LOC_Os08g15050, Os08g0249000.
  • OsBBX26,OsO, LOC_Os08g42440, Os08g0536300.
  • OsBBX28, LOC_Os09g33550, Os09g0509700.
  • OsBBX29,OsDBB1, LOC_Os09g35880, Os09g0527900.
  • OsBBX3,OsF, LOC_Os02g08150, Os02g0178100.
  • OsBBX30, LOC_Os12g10660, Os12g0209200.
  • OsBBX4,OsSTH, LOC_Os02g39360, Os02g0606200.
  • OsBBX6, LOC_Os02g43170, Os02g0646200.
  • OsBBX8,OsK, LOC_Os02g49880, Os02g0731700.
• PS prediction

  • OsBBX1

    OsDBB3c, PSP score: 0.6811

  • OsBBX10

    OsJ, PSP score: 0.4067

  • OsBBX11

    OsSTO, PSP score: 0.0547

  • OsBBX12

    OsC, PSP score: 0.1404

  • OsBBX13, PSP score: 0.8378

  • OsBBX14

    OsDBB3b, PSP score: 0.7881

  • OsBBX15, PSP score: 0.8407

  • OsBBX16

    OsDBB3a, PSP score: 0.6766

  • OsBBX17

    OsL, PSP score: 0.3226

  • OsBBX19

    OsM

    DTH2

    qDTH-2, PSP score: 0.5004

  • OsBBX2, PSP score: 0.8225

  • OsBBX20

    OsE, PSP score: 0.3091

  • OsBBX21, PSP score: 0.2541
  • OsBBX22, PSP score: 0.2433
  • OsBBX23, PSP score: 0.1658
  • OsBBX24, PSP score: 0.9845

  • OsBBX25

    OsG, PSP score: 0.2441

  • OsBBX26

    OsO, PSP score: 0.8653

  • OsBBX28, PSP score: 0.1042

  • OsBBX29

    OsDBB1, PSP score: 0.094

  • OsBBX3

    OsF, PSP score: 0.5363

  • OsBBX30, PSP score: 0.3514

  • OsBBX4

    OsSTH, PSP score: 0.6636

  • OsBBX6, PSP score: 0.8815

  • OsBBX8

    OsK, PSP score: 0.3095

• Publication
  • The rice B-box zinc finger gene family: genomic identification, characterization, expression profiling and diurnal analysis., 2012, PLoS ONE.
  • The common function of a novel subfamily of B-Box zinc finger proteins with reference to circadian-associated events in Arabidopsis thaliana., 2008, Biosci. Biotechnol. Biochem..
  • Isolation and mapping of a family of putative zinc-finger protein cDNAs from rice., 1998, DNA Res..
  • Association of functional nucleotide polymorphisms at DTH2 with the northward expansion of rice cultivation in Asia., 2013, Proc. Natl. Acad. Sci. U.S.A..

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