- Information
- Symbol: OsCLF,SDG711
- MSU: LOC_Os06g16390
- RAPdb: Os06g0275500
- PSP score
- LOC_Os06g16390.1: 0.7823
- PLAAC score
- LOC_Os06g16390.1: 0
- pLDDT score
- 64.55
- Protein Structure from AlphaFold and UniProt
- Publication
- Expression, imprinting, and evolution of rice homologs of the polycomb group genes, 2009, Mol Plant.
- Histone H3K4me3 and H3K27me3 regulatory genes control stable transmission of an epimutation in rice., 2015, Sci Rep.
- Imprinted Gene OsFIE1 Modulates Rice Seed Development by Influencing the Nutrient Metabolism and Modifying Genome H3K27me3., 2016, Plant J.
- Genbank accession number
- Key message
- NA
- The expression of SDG711 and SDG718 is induced by LD and SD, respectively.
- OsFIE1 specifically expressed in endosperm, and mRNA of OsFIE1 also enriched in inner seed coat with the corresponding PcG members of OsiEZ1 and OsCLF
- Connection
- OsCLF~SDG711, OsiEZ1~OsSET1~SDG718, Expression, imprinting, and evolution of rice homologs of the polycomb group genes, The rice genome contains two E(z)-like genes, OsiEZ1 and OsCLF, two homologs of Su(z)12, OsEMF2a and OsEMF2b, and two ESC-like genes, OsFIE1 and OsFIE2
- OsCLF~SDG711, OsFIE2, Expression, imprinting, and evolution of rice homologs of the polycomb group genes, The rice genome contains two E(z)-like genes, OsiEZ1 and OsCLF, two homologs of Su(z)12, OsEMF2a and OsEMF2b, and two ESC-like genes, OsFIE1 and OsFIE2
- OsCLF~SDG711, OsEMF2b, Expression, imprinting, and evolution of rice homologs of the polycomb group genes, The rice genome contains two E(z)-like genes, OsiEZ1 and OsCLF, two homologs of Su(z)12, OsEMF2a and OsEMF2b, and two ESC-like genes, OsFIE1 and OsFIE2
- OsCLF~SDG711, OsEMF2a, Expression, imprinting, and evolution of rice homologs of the polycomb group genes, The rice genome contains two E(z)-like genes, OsiEZ1 and OsCLF, two homologs of Su(z)12, OsEMF2a and OsEMF2b, and two ESC-like genes, OsFIE1 and OsFIE2
- OsCLF~SDG711, OsFIE1~Epi-df, Expression, imprinting, and evolution of rice homologs of the polycomb group genes, The rice genome contains two E(z)-like genes, OsiEZ1 and OsCLF, two homologs of Su(z)12, OsEMF2a and OsEMF2b, and two ESC-like genes, OsFIE1 and OsFIE2
- Ehd1, OsCLF~SDG711, , SDG711 was also found to be involved in the repression of Ehd1 in LD.
- Ehd1, OsCLF~SDG711, , SDG711 was shown to directly target to OsLF and Ehd1 loci to mediate H3K27me3 and gene repression.
- JMJ703, OsCLF~SDG711, Regulation of Histone Methylation and Reprogramming of Gene Expression in the Rice Inflorescence Meristem., Thousands of genes gained or lost H3K27me3 in IM, and downregulation of the H3K27 methyltransferase gene SET DOMAIN GROUP 711 (SDG711) or mutation of the H3K4 demethylase gene JMJ703 eliminated the increase of H3K27me3 in many genes
- JMJ703, OsCLF~SDG711, Regulation of Histone Methylation and Reprogramming of Gene Expression in the Rice Inflorescence Meristem., Double knockdown/knockout of SDG711 and JMJ703 further reduced panicle size
- JMJ703, OsCLF~SDG711, Regulation of Histone Methylation and Reprogramming of Gene Expression in the Rice Inflorescence Meristem., These results suggest that SDG711 and JMJ703 have agonistic functions in reprogramming the H3K27me3/H3K4me3 ratio and modulating gene expression in the IM
- CHR729~OsCHD3~CRL6, OsCLF~SDG711, Histone H3K4me3 and H3K27me3 regulatory genes control stable transmission of an epimutation in rice., Here we show that maintenance of a stably hypomethylated active epiallele in rice required a CHD3 protein (CHR729) and that over-expression of an H3K4me3 demethylase (JMJ703) or H3K27me3 methyltransferase (SDG711) could stably resilence the epiallele
- JMJ703, OsCLF~SDG711, Histone H3K4me3 and H3K27me3 regulatory genes control stable transmission of an epimutation in rice., Here we show that maintenance of a stably hypomethylated active epiallele in rice required a CHD3 protein (CHR729) and that over-expression of an H3K4me3 demethylase (JMJ703) or H3K27me3 methyltransferase (SDG711) could stably resilence the epiallele
- OsCLF~SDG711, OsFIE1~Epi-df, Imprinted Gene OsFIE1 Modulates Rice Seed Development by Influencing the Nutrient Metabolism and Modifying Genome H3K27me3., OsFIE1 specifically expressed in endosperm, and mRNA of OsFIE1 also enriched in inner seed coat with the corresponding PcG members of OsiEZ1 and OsCLF
- OsCLF~SDG711, OsiEZ1~OsSET1~SDG718, Imprinted Gene OsFIE1 Modulates Rice Seed Development by Influencing the Nutrient Metabolism and Modifying Genome H3K27me3., OsFIE1 specifically expressed in endosperm, and mRNA of OsFIE1 also enriched in inner seed coat with the corresponding PcG members of OsiEZ1 and OsCLF
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