RBG

2022-11-15 | Categories gene family 

• Information
  • OsRBGA1, LOC_Os01g68790, Os01g0916600.
  • OsRBGA2, LOC_Os03g46770, Os03g0670700.
  • OsRBGA3, LOC_Os07g41120, Os07g0602600.
  • OsRBGA4, LOC_Os10g17454, Os10g0321700.
  • OsRBGA5, LOC_Os12g31800, Os12g0502200.
  • OsRBGA6, LOC_Os12g43600, Os12g0632000.
  • OsRBGB1, LOC_Os03g47800, Os03g0681900.
  • OsRBGB2, LOC_Os03g61990, Os03g0836200.
  • OsRBGD1, LOC_Os02g12850, Os02g0221500.
  • OsRBGD2, LOC_Os08g23120, Os08g0320100.
  • OsRBGD3, LOC_Os08g38410, Os08g0492100.
  • OsRBGD4, LOC_Os10g33230, Os10g0470900.
• PS prediction
  • OsRBGA1, PSP score: 0.9899
  • OsRBGA2, PSP score: 0.9975, PLAAC score: 21.244
  • OsRBGA3, PSP score: 0.7942, PLAAC score: 17.142
  • OsRBGA4, PSP score: 0.9954, PLAAC score: 32.409
  • OsRBGA5, PSP score: 0.9964, PLAAC score: 32.391
  • OsRBGA6, PSP score: 0.9957, PLAAC score: 24.099
  • OsRBGB1, PSP score: 0.6359
  • OsRBGB2, PSP score: 0.9595
  • OsRBGD1, PSP score: 0.9961, PLAAC score: 39.768
  • OsRBGD2, PSP score: 0.9856, PLAAC score: 17.357
  • OsRBGD3, PSP score: 0.9796, PLAAC score: 14.819
  • OsRBGD4, PSP score: 0.9971, PLAAC score: 76.244
• Publication
  • Defining the RNA-binding glycine-rich RBG gene superfamily: new insights into nomenclature, phylogeny, and evolutionary trends obtained by genome-wide comparative analysis of Arabidopsis, Chinese cabbage, rice and maize genomes., 2015, Mol Genet Genomics.

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