- Information
- Symbol: qSH1, RIL1
- MSU: LOC_Os01g62920
- RAPdb: Os01g0848400
- PSP score
- LOC_Os01g62920.1: 0.9977
- PLAAC score
- LOC_Os01g62920.1: 14.158
- pLDDT score
- 53.75
- Protein Structure from AlphaFold and UniProt
- Publication
- Genbank accession number
- Key message
- Here, we studied nucleotide variation at the shattering loci, sh4 and qSH1, for cultivated rice, Oryza sativa ssp
- We revealed that the qSH1 gene, a major quantitative trait locus of seed shattering in rice, encodes a BEL1-type homeobox gene and demonstrated that a single-nucleotide polymorphism (SNP) in the 5’ regulatory region of the qSH1 gene caused loss of seed shattering owing to the absence of abscission layer formation
- Genomewide association analysis for awn length linked to the seed shattering gene qSH1 in rice.
- Special interest was the detection of the most significant association SNP, sf0136352825, which was less than 95 kb from the seed shattering gene qSH1
- Connection
- qSH1, sh4~SHA1, Selection on grain shattering genes and rates of rice domestication, Here, we studied nucleotide variation at the shattering loci, sh4 and qSH1, for cultivated rice, Oryza sativa ssp
- qSH1, SH5, The BEL1-type homeobox gene SH5 induces seed shattering by enhancing abscission-zone development and inhibiting lignin biosynthesis, Os05 g38120 (SH5) on chromosome 5 is highly homologous to qSH1
- D6~OSH15~Oskn3, qSH1, KNOX Protein OSH15 Induces Grain Shattering by Repressing Lignin Biosynthesis Genes., Co-immunoprecipitation experiments revealed that OSH15 interacts with SH5 and qSH1, two proteins in the BELL homeobox family
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